publications

2023

  1. Hum Genomics
    Decoding cell-type contributions to the cfRNA transcriptomic landscape of liver cancer
    Aram Safrastyan, Christian Höner Zu Siederdissen, and Damian Wollny
    Human Genomics 2023
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  2. bioRxiv
    RNA-based sensitive fungal pathogen detection
    Julia Micheel, Franziska Aron, Abdulrahman A Kelani, Christian Girbardt, Matthew G Blango, Grit Walther, and Damian Wollny
    bioRxiv 2023
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  3. bioRxiv
    Detection of reproducible liver cancer specific ligand-receptor signaling in blood
    Aram Safrastyan, and Damian Wollny
    bioRxiv 2023
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  4. Nature
    Efficient high-precision homology-directed repair-dependent genome editing by HDRobust
    Stephan Riesenberg, Philipp Kanis, Dominik Macak, Damian Wollny, Dorothee Düsterhöft, Johannes Kowalewski, Nelly Helmbrecht, Tomislav Maricic, and Svante Pääbo
    Nature Methods 2023
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2022

  1. Nature
    Inferring and perturbing cell fate regulomes in human cerebral organoids
    Jonas S Fleck, Sophie MJ Jansen, Damian Wollny, Fides Zenk, Akanksha Jain, Ryoko Okamoto, Makiko Seimiya, Malgorzata Santel, Zhisong He, J Gray Camp, and Barbara Treutlein
    Nature 2022
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  2. Front Genet
    Network analysis of hepatocellular carcinoma liquid biopsies augmented by single-cell sequencing data
    Aram Safrastyan, and Damian Wollny
    Frontiers in Genetics 2022
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  3. Nat Commun
    Characterization of RNA content in individual phase-separated coacervate microdroplets
    Damian Wollny, Benjamin Vernot, Jie Wang, Maria Hondele, Aram Safrastyan, Franziska Aron, Julia Micheel, Anthony A Hyman, Karsten Weis, J Gray Camp, TY Dora Tang, and Barbara Treutlein
    Nature Communication 2022
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2021

  1. Noncoding RNA
    Advances in Non-Coding RNA Sequencing
    Julia Micheel, Aram Safrastyan, and Damian Wollny
    Noncoding RNA 2021
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  2. bioRxiv
    Inferring and perturbing cell fate regulomes in human cerebral organoids
    Jonas Simon Fleck, Sophie MJ Jansen, Damian Wollny, Makiko Seimiya, Fides Zenk, Malgorzata Santel, Zhisong He, J Gray Camp, and Barbara Treutlein
    bioRxiv 2021
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  3. bioRxiv
    Characterization of RNA content in individual phase-separated coacervate microdroplets
    Damian Wollny, Benjamin Vernot, Jie Wang, Maria Hondele, Anthony A Hyman, Karsten Weis, J Gray Camp, TY Dora Tang, and Barbara Treutlein
    bioRxiv 2021
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2020

  1. ChemSysChem
    Opportunities for Single-Cell Sequencing in Synthetic Biology
    Damian Wollny
    ChemSystemsChem 2020
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2018

  1. Nat Methods
    Single-cell genomics to guide human stem cell and tissue engineering
    J Gray Camp, Damian Wollny, and Barbara Treutlein
    Nature methods 2018
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  2. Front Neurosci
    ShinyCortex: Exploring single-cell transcriptome data from the developing human cortex
    Jorge Kageyama, Damian Wollny, Barbara Treutlein, and J Gray Camp
    Frontiers in neuroscience 2018
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2017

  1. PhD thesis
    Single cell analysis uncovers clonal heterogeneity in the adult exocrine pancreas
    Damian Wollny
    2017
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2016

  1. Dev Cell
    Single-cell analysis uncovers clonal acinar cell heterogeneity in the adult pancreas
    Damian Wollny, Sheng Zhao, Isabelle Everlien, Xiaokang Lun, Jan Brunken, Daniel Brüne, Frederik Ziebell, Inna Tabansky, Wilko Weichert, Anna Marciniak-Czochra, and others
    Developmental Cell 2016
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  2. bioRxiv
    RNA-seq library preparation from single pancreatic acinar cells
    Damian Wollny, Sheng Zhao, and Ana Martin-Villalba
    bioRxiv 2016
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2015

  1. Cell Death Differ
    CD95 promotes metastatic spread via Sck in pancreatic ductal adenocarcinoma
    M Teodorczyk, S Kleber, D Wollny, JP Sefrin, B Aykut, A Mateos, P Herhaus, I Sancho-Martinez, O Hill, C Gieffers, and others
    Cell Death & Differentiation 2015
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2014

  1. PLoS Genet
    Syndecan-1 is required to maintain intradermal fat and prevent cold stress
    Ildiko Kasza, Yewseok Suh, Damian Wollny, Rod J Clark, Avtar Roopra, Ricki J Colman, Ormond A MacDougald, Timothy A Shedd, David W Nelson, Mei-I Yen, and others
    PLoS Genetics 2014
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2013

  1. Trends Mol Med
    CD95 in cancer: tool or target?
    Ana Martin-Villalba, Enric Llorens-Bobadilla, and Damian Wollny
    Trends in molecular medicine 2013
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